
In single.php replace:
$thumbnail = get_thumbnail($width,$height,$classtext,$titletext,$titletext);
$thumb = $thumbnail["thumb"];
if($thumb <> '') { ?>
<?php print_thumbnail($thumb, $thumbnail["use_timthumb"], $titletext, $width, $height, $classtext); ?>with
<!-- Modification 3/6/14 to display thumbnail from custom field -->
$myThumb = get_post_meta($post->ID, 'Thumbnail', true);
if($myThumb <> '') { ?>
<img src="<?php print($myThumb) ?>" class='thumbnail alignleft' alt='GitHub Developer Program Emphasizes Integrations' width='172' height='172' />
<?php } else {
$thumbnail = get_thumbnail($width,$height,$classtext,$titletext,$titletext);
$thumb = $thumbnail["thumb"];
if($thumb <> '') { ?>
<?php print_thumbnail($thumb, $thumbnail["use_timthumb"], $titletext, $width, $height, $classtext); ?>
<?php }; ?>
<!-- End Modification -->